About the Gecko Cluster

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The cluster was was deliverded to the school at the end of the summer 2008. It was purchased from StreamLine Computing with SRIF funding, to provide a central HPC resource for research at the School. The service is hosted by IT Services in the Keppel Street building.
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=Overview=
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The cluster as delivered in 2008 consists of 30 compute nodes, 1 Head node, Ininfband and Gig Ethernet backbone. The os running on the cluster is Suse 10.1 (hence the gecko name) and the Job Scheduler is Sun Grid Engine 6.
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[[Image:Cluster-front.jpg|right|thumb|Gecko cluster, photo of cluster from front of rack]] The cluster was was deliverded to the school at the end of the summer 2008. It was purchased from StreamLine Computing with SRIF funding, to provide a central HPC resource for research at the School. The service is hosted by IT Services in the Keppel Street building. It has since been upgraded with some newer hardware and various OS updates.
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The OS running on the cluster is Scientific/Centos 7 linux  and the Job Scheduler is Open Grid Scheduler (previously Sun Grid Engine).
A quick over view:
A quick over view:
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* Suse 10.1 64bit Linux OS
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* Scientific Linux 7
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* 30 compute nodes 2x 2.5GHz Quad Core Intel Xeons with 16GB of memory (i.e. 8 jobs with 2GB memory each per node)
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* 18 Nodes
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* 3.7TB of user storage (shared across the cluster)
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** 18 nodes with between 32GB-256GB RAM and 8-32 CPU cores (a mixture of Intel and AMD CPUs)
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* Infiniband network for parallel computation
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* Each user has 200GB of storage by default
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* OpenMP for single node multi core/processor parallel computation and OpenMPI (intel and gcc) for parallel computation across the cluster via the Inifiniband network.
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* OpenMP for single node multi core/processor parallel computation and OpenMPI ( gcc) for parallel computation across the cluster
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* Sun Grid Engine 6 to manage job submission and queue management
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* Intel C++/Fortran, GNU, Java 1.4,1.5,1.6 and R compilers
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* Stata 10 se
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Please [[Available Software]] page for a more complete of software on the cluster.
[[Image:Gecko-cluster-layout.png|left|thumb|Gecko cluster, rack layout]]
[[Image:Gecko-cluster-layout.png|left|thumb|Gecko cluster, rack layout]]
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[[Image:Cluster-back.jpg|left|thumb|Gecko cluster, picture from the back of the rack]]
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[[Category:About]]
[[Category:About]]

Current revision as of 19:22, 20 June 2019

Overview

Gecko cluster, photo of cluster from front of rack
The cluster was was deliverded to the school at the end of the summer 2008. It was purchased from StreamLine Computing with SRIF funding, to provide a central HPC resource for research at the School. The service is hosted by IT Services in the Keppel Street building. It has since been upgraded with some newer hardware and various OS updates.
The OS running on the cluster is Scientific/Centos 7 linux  and the Job Scheduler is Open Grid Scheduler (previously Sun Grid Engine).

A quick over view:

  • Scientific Linux 7
  • 18 Nodes
    • 18 nodes with between 32GB-256GB RAM and 8-32 CPU cores (a mixture of Intel and AMD CPUs)
  • Each user has 200GB of storage by default
  • OpenMP for single node multi core/processor parallel computation and OpenMPI ( gcc) for parallel computation across the cluster


Please Available Software page for a more complete of software on the cluster.

Gecko cluster, rack layout


Gecko cluster, picture from the back of the rack
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